rs13256399 chr8:124564809 G>T
- Sequence
aggtctgaacttcctgctaagtgt[G/T]tagtgtacaagctccgcagtgaaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- ETS1_HUMAN SPI1_HUMAN SMCA4_HUMAN FLI1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETS1_HUMAN | 2.14 | -0.65 | 1.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.47 | 0.02 | 1.08 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.41 | -0.51 | 1.00 | n/a | n/a | |||
| FLI1_HUMAN | 1.85 | -0.79 | 1.00 | n/a | No Hit | |||
| CDK9_HUMAN | 2.08 | 0.32 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Esophagus_Gastroesophageal_Junction, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Thyroid, Whole_Blood