rs13260356 chr8:38798783 G>A

Sequence
cggggatcctgggccccagcagtt[G/A]ttggggaaatgtgagctatgcagc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN SOX6_HUMAN MEIS2_HUMAN KDM1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.44 n/a 4.2·10-61.00 2.00 n/a n/a
SOX6_HUMAN 2.98 -5.49 0.011.00 2.00 n/a No Hit
MEIS2_HUMAN 2.77 -5.29 0.021.00 2.00 n/a No Hit
KDM1A_HUMAN 2.14 -1.04 0.031.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol height triglycerides
GTEx eQTL Heart_Atrial_Appendage Whole_Blood

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