rs13260853 chr8:127898967 C>T
- Sequence
cccgttgacttatctggctccaac[C/T]gaagaacagctgttggtggtcagg
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- GATA1_HUMAN COT1_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 3.50 | 0.52 | 1.93 | -0.82 | Weak Concordant | |||
| COT1_HUMAN | n/a | 2.30 | 2.00 | n/a | No Hit | |||
| EGR1_HUMAN | -1.09 | 1.49 | 2.00 | n/a | No Hit |
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Motif analysis
