rs13261370 chr8:9063413 T>C
- Sequence
gggcaggtgggggagggctagtca[T/C]ggaatgaaactgtaagccagaccg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN KDM1A_HUMAN HDAC2_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.87 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.26 | n/a | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 3.12 | -1.25 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | 2.31 | -0.69 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 3.25 | 0.18 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid