rs13267482 chr8:141853281 T>C
- Sequence
ctgtgcccagggccaggcagtgcc[T/C]gcatgcatgggcacacacaaacac
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.95 | 0.09 | 1.72 | -0.29 | Weak Concordant | |||
| FOXA1_HUMAN | 1.99 | -3.47 | 1.50 | n/a | No Hit |
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Motif analysis
