rs13277524 chr8:42694914 G>T

Sequence
gtgcttgtgtgtgtgcactggaag[G/T]aagtaaagcattgatggtgattgg
ASB in cell types
CAR-T cells Th1-cells
ASB for transcription factors
IRF4_HUMAN TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IRF4_HUMAN 4.42 -4.30 1.8·10-111.00 1.00 -3.38 Concordant
TBX21_HUMAN 2.85 -4.85 1.3·10-31.00 1.50 n/a No Hit
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Motif analysis

IRF4_HUMAN Concordant
IRF4_HUMAN pic

Genetic associations

GRASP nicotine dependence (smoking)
GTEx eQTL Esophagus_Gastroesophageal_Junction Thyroid

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