rs13280976 chr8:57992306 C>T
- Sequence
aaatattccagcatagatgtttta[C/T]tgtgttctctctgtctctttaacc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN CDX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.20 | -0.32 | 2.33 | 1.14 | Weak Discordant | |||
| CDX2_HUMAN | -1.24 | 1.68 | 1.00 | 3.19 | Concordant |
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Motif analysis
