rs13282164 chr8:124637659 C>T
- Sequence
aaacaggtggtcacctcctccgtt[C/T]acaccctagaaggggtggaattta
- ASB in cell types
- ICN12 (primary pre-B acute lymphomablastic leukemia) MOLT3 (adult T acute lymphoblastic leukemia) MOLM14 (Adult acute myeloid leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- TAL1_HUMAN TFE2_HUMAN CDK8_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | n/a | 3.97 | 2.00 | n/a | No Hit | |||
| TFE2_HUMAN | -4.77 | 3.38 | 1.33 | n/a | No Hit | |||
| CDK8_HUMAN | -3.68 | 1.34 | 2.00 | n/a | n/a | |||
| CDK9_HUMAN | -2.84 | 1.67 | 2.00 | n/a | n/a | |||
| PBX1_HUMAN | -3.48 | 2.22 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, chronic kidney disease, cystatin c in serum, fasting insulin, hdl cholesterol change with statins, homa-ir