rs13285330 chr9:129550379 G>C
- Sequence
aagccgcgcgcggttgccaggaac[G/C]cggcaggcgatcggagctggacgg
- ASB in cell types
- HCT-116 (colon carcinoma) GBM39 (Human brain tumor)
- ASB for transcription factors
- MBD4_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MBD4_HUMAN | 2.60 | -0.90 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.89 | -1.11 | 1.67 | n/a | n/a | |||
| SMC3_HUMAN | 1.77 | -1.94 | 1.50 | n/a | n/a |
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