rs13285633 chr9:33186790 G>A

Sequence
acagagtccctgccagctgaggct[G/A]tagtttggccccatagaaagtttt
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) HAEC (human aortic endothelial cells)
ASB for transcription factors
TCF21_HUMAN TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 1.03 n/a 5.1·10-41.00 3.00 0.34 Weak Discordant
TF65_HUMAN 2.21 -0.58 4.5·10-31.00 1.83 n/a No Hit
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Motif analysis

TCF21_HUMAN Weak Discordant
TCF21_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  systolic blood pressure (sbp),  urinary albumin-to-creatinine ratio
GTEx eQTL Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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