rs13285675 chr9:89522403 C>T

Sequence
ggcactcagtagtctttgttgagt[C/T]gtagggttgaaggggtcagagaga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages)
ASB for transcription factors
FOXK2_HUMAN SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 3.25 n/a 1.1·10-41.00 1.00 n/a No Hit
SPI1_HUMAN 1.67 -0.11 0.021.00 2.10 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Whole_Blood

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