rs13299681 chr9:37422523 C>T
- Sequence
cccagtggcacgaggcgcaccccc[C/T]cacacacacacaaggacactgtgt
- ASB in cell types
- K562 (myelogenous leukemia) MDA-MB-453 (breast adenocarcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- NR2C1_HUMAN GCR_HUMAN RFOX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | 1.64 | -1.24 | 1.00 | n/a | No Hit | |||
| GCR_HUMAN | -0.11 | 0.86 | 1.00 | n/a | No Hit | |||
| RFOX2_HUMAN | -1.39 | 1.73 | 1.00 | n/a | n/a |
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