rs13326007 chr3:194058468 G>T
- Sequence
gggagctcgggtttcccccgccgc[G/T]aggctgagccggtggcgcagctgc
- ASB in cell types
- HepG2 (hepatoblastoma) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.56 | 2.38 | 1.00 | 2.25 | Concordant |
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Motif analysis
