rs13331086 chr16:23196796 T>G
- Sequence
tctggtgctgtgtccgcatagact[T/G]cagggggcaagagcaggagtggga
- ASB in cell types
- LNCaP (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- GLIS1_HUMAN FOXA2_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | -3.83 | 2.35 | 1.50 | 4.22 | Concordant | |||
| FOXA2_HUMAN | n/a | 2.95 | 3.00 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.22 | 1.46 | 1.59 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
