rs13331366 chr16:58265889 G>C
- Sequence
ggcctcgctgctgctcttgtacct[G/C]cattccttcctgccctgccgctct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZNF24_HUMAN E4F1_HUMAN REQU_HUMAN ZEB2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | 2.06 | 0.75 | 2.00 | -1.59 | Weak Concordant | |||
| E4F1_HUMAN | 2.90 | -5.13 | 2.00 | n/a | No Hit | |||
| REQU_HUMAN | 2.60 | 0.03 | 2.00 | n/a | n/a | |||
| ZEB2_HUMAN | 2.82 | -5.34 | 2.00 | -2.21 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Nerve_Tibial, Testis