rs13331556 chr16:58265666 C>T
- Sequence
ccagccacactgtgcgcagacttc[C/T]ggcctatggaagctgtgagataat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- E4F1_HUMAN EP400_HUMAN REQU_HUMAN ELF4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E4F1_HUMAN | 2.93 | n/a | 2.00 | -5.28 | Concordant | |||
| EP400_HUMAN | 2.69 | n/a | 2.00 | n/a | n/a | |||
| REQU_HUMAN | 1.43 | n/a | 2.00 | n/a | n/a | |||
| ELF4_HUMAN | 2.42 | n/a | 2.00 | -4.79 | Concordant | |||
| NCOR1_HUMAN | 1.02 | -3.97 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Nerve_Tibial, Testis