rs13334621 chr16:22378940 T>C
- Sequence
attgaaaaactggtgtcagttttc[T/C]gtgctaaatttggtgaagtttcca
- ASB in cell types
- SU-DHL-10 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | -0.72 | 1.90 | 1.00 | -0.18 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP bipolar disorder, bipolar disorder in alcoholics, chronic kidney disease, recurrent early onset major depressive disorder, recurrent early onset major depressive disorder (females)
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood