rs13335625 chr16:85000423 T>C
- Sequence
ttttccttggctataaacagaaaa[T/C]gtatttctcaggaacacactgaaa
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.77 | -5.29 | 2.00 | -0.79 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Prostate, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood