rs13340538 chr7:34852555 G>T
- Sequence
gagcttctggaattctttccccag[G/T]ggaccaatgactcagtgacttaat
- ASB in cell types
- MCF10A (breast epithelial cells)
- ASB for transcription factors
- TEAD4_HUMAN FOS_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD4_HUMAN | 2.39 | -0.01 | 1.00 | 0.56 | Weak Discordant | |||
| FOS_HUMAN | 0.62 | -0.05 | 1.00 | n/a | No Hit |
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Motif analysis
