rs13345379 chr19:17776754 G>A
- Sequence
ctccctccacctccccatgtctcc[G/A]cctggtgttctcttgtcccggctg
- ASB in cell types
- GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- HTF4_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | -0.63 | 1.42 | 1.33 | 3.40 | Concordant | |||
| CTCF_HUMAN | 0.14 | 1.48 | 1.19 | 1.95 | Weak Concordant |
Items per page:
1 – 2 of 2
Motif analysis
