rs13356414 chr5:151080683 C>T
- Sequence
gcagtgcgcacgcgcgccccccac[C/T]aggcccagcgccaagcagggagta
- ASB in cell types
- HEK293T (embryonic kidney) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.14 | 0.61 | 1.02 | 1.51 | Weak Discordant | |||
| ANDR_HUMAN | 1.64 | -1.33 | 2.00 | n/a | No Hit |
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Motif analysis
