rs13360903 chr5:142441848 G>A

Sequence
ctcctcctcacttggcccttcctc[G/A]tcagtattggctttcagctctcct
ASB in cell types
K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia) foreskin keratinocyte
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 0.07 2.52 1.007.1·10-4 1.00 2.75 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP body mass index (bmi),  diastolic blood pressure (dbp),  infant head circumference,  microalbuminuria,  obesity with early age of onset (age >2),  systolic blood pressure (sbp),  urinary albumin-to-creatinine ratio
GTEx eQTL Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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