rs133769 chr22:44449648 C>T
- Sequence
actgctgattcattctctgagctt[C/T]ggcatctttgtctattaaatgctc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HKC8 (kidney proximal tubule cell line) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- JUN_HUMAN IKZF2_HUMAN EPAS1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.66 | -2.93 | 1.50 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.25 | -1.90 | 1.50 | n/a | n/a | |||
| EPAS1_HUMAN | 1.58 | -0.01 | 1.40 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.30 | n/a | 1.50 | n/a | n/a |
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