ADASTRA v6.1.0
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rs133771
chr22:44449527
C
>
T
Sequence
ggaaccacagtcaacctgcagacc[C/T]ggaaaaggggaaatcacatgcctg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
RUNX3_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.73
n/a
3.9·10
-3
1.00
2.00
n/a
No Hit
RUNX3_HUMAN
2.57
n/a
0.02
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
childhood acute lymphoblastic leukemia
,
infant head circumference
,
resistance to kuru in aged women despite likely exposure
,
spine bone mineral density (bmd)
GTEx eQTL
Muscle_Skeletal
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)