rs133771 chr22:44449527 C>T

Sequence
ggaaccacagtcaacctgcagacc[C/T]ggaaaaggggaaatcacatgcctg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN RUNX3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.73 n/a 3.9·10-31.00 2.00 n/a No Hit
RUNX3_HUMAN 2.57 n/a 0.021.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP childhood acute lymphoblastic leukemia infant head circumference resistance to kuru in aged women despite likely exposure spine bone mineral density (bmd)
GTEx eQTL Muscle_Skeletal Whole_Blood

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