rs13379369 chr14:105863077 A>G
- Sequence
gatcctcaaggcaccccagtgccc[A/G]tcccctcctggccagtccgcccag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
- ASB for transcription factors
- BRD4_HUMAN IKZF2_HUMAN SMCA5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.06 | 2.71 | 3.00 | n/a | n/a | |||
| IKZF2_HUMAN | -0.48 | 1.72 | 1.00 | n/a | n/a | |||
| SMCA5_HUMAN | n/a | 2.40 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Colon_Transverse, Esophagus_Mucosa, Lung, Spleen, Thyroid, Whole_Blood