rs13382384 chr2:38524077 T>C
- Sequence
tgtggggcctttttttaaactttc[T/C]tactcaaaggaatgaagctgtagt
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) K562 (myelogenous leukemia) GM12892 (female B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -0.66 | 1.57 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Coronary, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg