rs13390017 chr2:57444439 G>T
- Sequence
cctccaccaacatgtatagcctcg[G/T]ggggagttccctatggtcagttaa
- ASB in cell types
- monocytes from periferal blood
- ASB for transcription factors
- SRBP2_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 2.33 | -1.20 | 3.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.52 | n/a | 2.00 | -0.11 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP acute lung injury following major trauma, advanced age-related macular degeneration, aortic valve calcium, microalbuminuria, urinary albumin-to-creatinine ratio