rs13392101 chr2:159286891 C>T
- Sequence
ggcggcgcatgcgcgctcttccgc[C/T]cggactgcgagttcctccccagct
- ASB in cell types
- breast tumor CD14+ monocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN ANDR_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.30 | 0.01 | 1.62 | n/a | No Hit | |||
| ANDR_HUMAN | 2.94 | -5.27 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.04 | 0.09 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Colon_Sigmoid, Heart_Left_Ventricle, Nerve_Tibial, Thyroid