rs13403414 chr2:57444556 T>C
- Sequence
cacaattacagccactcgcagatg[T/C]tatcctggaactggatcctctcag
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.09 | n/a | 3.00 | 0.43 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration, aortic valve calcium, late onset alzheimers disease, microalbuminuria, urinary albumin-to-creatinine ratio