rs13412895 chr2:9753325 T>C
- Sequence
aacttccaggctgtgtcatgccca[T/C]tatgcagagaagtgaaatgaatca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) A549 (lung carcinoma) monocyte-derived macrophages from peripheral blood HAEC (human aortic endothelial cells)
- ASB for transcription factors
- SIN3A_HUMAN MAFK_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIN3A_HUMAN | -1.91 | 2.23 | 1.00 | n/a | n/a | |||
| MAFK_HUMAN | -1.59 | 1.59 | 1.00 | -1.79 | Weak Discordant | |||
| SPI1_HUMAN | 1.50 | 0.76 | 1.34 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
