rs13420511 chr2:69734380 G>C
- Sequence
tgtagactaagctaatcatggaaa[G/C]aatttagattatagtttaactgta
- ASB in cell types
- A549 (lung carcinoma) AML (monocytes and acute myeloid leukemia) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- JUN_HUMAN MYB_HUMAN EP300_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.70 | 0.24 | 1.00 | n/a | No Hit | |||
| MYB_HUMAN | n/a | 3.04 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.44 | -0.06 | 1.75 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Pituitary, Testis, Whole_Blood