rs13424069 chr2:11207335 T>C

Sequence
actagagtacatcctatgacatga[T/C]taaaaatttacatgctgtttattt
ASB in cell types
CWR22 (prostate carcinoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.61 0.45 2.0·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  height,  lung function, ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc)
GTEx eQTL Brain_Cerebellum,  Muscle_Skeletal,  Pituitary,  Whole_Blood

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