rs13438029 chr7:143008329 T>C

Sequence
attagcagcatccacggaagacgg[T/C]ggcttcctctcatatagatccagt
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.86 0.47 1.1·10-41.00 1.24 2.37 Discordant
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Motif analysis

CTCF_HUMAN Discordant
CTCF_HUMAN pic

Genetic associations

GRASP asthma ldl cholesterol total cholesterol total cholesterol change with statins years of education
GTEx eQTL Muscle_Skeletal

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