rs135710 chr22:38260679 A>G

Sequence
agagggacggaataatgagtgaac[A/G]cagaaagcactgagaaggtctggc
ASB in cell types
monocytes from periferal blood MS-1 (Small cell lung carcinoma)
ASB for transcription factors
SRBP2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN -1.08 2.04 1.009.8·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  obesity with early age of onset (age >2)
GTEx eQTL Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Thyroid,  Whole_Blood

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