rs13614 chr11:33736395 A>G
- Sequence
ggccttcttacctggcggcgccca[A/G]gatcctcttccagcctcgagccgc
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- TYY1_HUMAN NELFA_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -0.69 | 3.11 | 1.90 | n/a | No Hit | |||
| NELFA_HUMAN | n/a | 1.46 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.98 | 0.21 | 1.15 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Prostate, Spleen, Stomach, Testis, Thyroid, Whole_Blood