rs1369165 chr8:68152861 A>C

Sequence
gtcagtttcttgctgtttttatgg[A/C]tctccacaggagtgtgtccgtagt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RING2_HUMAN KDM1A_HUMAN NFE2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RING2_HUMAN n/a 3.34 1.002.1·10-5 2.00 n/a n/a
KDM1A_HUMAN n/a 3.51 1.001.2·10-3 2.00 n/a n/a
NFE2_HUMAN n/a 3.06 1.006.3·10-3 2.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  homa-b,  homa-ir,  partial epilepsy
GTEx eQTL Esophagus_Mucosa

Download