rs1370339 chr2:80687989 C>T
- Sequence
ttatctgggtctggcttttgctac[C/T]ttcttattagattctcagagagct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.96 | -0.24 | 1.12 |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, height, ldl cholesterol, major depressive disorder, neuroblastoma (brain cancer), stabilized warfarin dose