rs1371457 chr10:77388075 C>A

Sequence
aagttcaccattgctagacttgat[C/A]tcttctaatccttaaacactagag
ASB in cell types
D283 Med (medulloblastoma) embryonic stem cell-derived pancreatic cells
ASB for transcription factors
OTX2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 1.69 -1.13 5.9·10-71.00 1.11 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP myopia,  neuroticism,  plasma aldosterone concentration corrected by plasma renin activity,  premature ovarian failure,  schizophrenia
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis

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