rs1372631 chr18:4026587 T>G
- Sequence
agcactatctatgagatggagctc[T/G]gagtataagcaatcatttctggtt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN RELB_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.61 | 2.65 | 1.25 | n/a | n/a | |||
| IKZF2_HUMAN | -0.72 | 1.88 | 2.00 | n/a | n/a | |||
| RELB_HUMAN | -2.24 | 2.36 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP irritible bowel syndrome, maternal transmission distortion, nicotine dependence (smoking), transmission distortion