rs1374190 chr2:37919089 A>C
- Sequence
ggttgttaaataaggaagtcctaa[A/C]atgagaggggagccagggttagtg
- ASB in cell types
- MDM(monocyte derived macrophages)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.44 | -0.02 | 1.71 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), fasting insulin, hdl cholesterol change with statins, homa-b, homa-ir, ldl cholesterol change with statins, microalbuminuria, primary rhegmatogenous retinal detachment, spine bone mineral density (bmd), sporadic creutzfeldt-jakob disease, total cholesterol change with statins, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood