rs1374983 chr6:127574608 C>T
- Sequence
aaggagattccttgaaagctgcaa[C/T]ttaacaatttggccacagctttat
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GATA2_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.38 | 1.68 | 2.00 | n/a | No Hit | |||
| GATA2_HUMAN | -1.02 | 2.29 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -0.06 | 1.21 | 1.94 | n/a | No Hit |
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