ADASTRA v6.1.0
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rs137585
chr22:39287439
G
>
A
Sequence
tacacttggtggtggaaataacag[G/A]catttattctcatagctctggagg
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines)
GM18486 (Lymphoblastoid Cell Lines)
GM12892 (female B-cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12890 (Lymphoblastoid Cell Lines)
-2.93
3.24
1.00
1.4·10
-5
1.00
GM18486 (Lymphoblastoid Cell Lines)
2.41
-0.50
5.3·10
-3
1.00
1.00
GM12892 (female B-cells lymphoblastoid cell line)
-0.86
1.53
1.00
0.03
1.00
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
rheumatoid arthritis
GTEx eQTL
Adipose_Subcutaneous
,
Brain_Cortex
,
Cells_EBV-transformed_lymphocytes
,
Liver
,
Pancreas
,
Pituitary
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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