rs1376429 chr2:2613644 C>G
- Sequence
agcatgcaccggagtagcgggcgt[C/G]atcaacaaccccctacgtgccgcg
- ASB in cell types
- K562 (myelogenous leukemia) NCI-H2171 (small cell lung carcinoma)
- ASB for transcription factors
- MNT_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -0.09 | 1.90 | 1.75 | n/a | No Hit | |||
| CREB1_HUMAN | 0.96 | 0.01 | 1.38 | -4.23 | Concordant |
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Motif analysis
