rs1376908 chr5:102442698 A>G
- Sequence
ttaattccactgatgcaatttatc[A/G]taaggttaaacataaaagtaagaa
- ASB in cell types
- D283 Med (medulloblastoma)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | -2.63 | 1.53 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Brain_Cortex, Brain_Frontal_Cortex_BA9, Minor_Salivary_Gland, Small_Intestine_Terminal_Ileum, Testis, Thyroid