rs1377392 chr6:53433687 T>C
- Sequence
gtgtgcatttcctaaatgcaggga[T/C]gacatctttgacttctttccgaat
- ASB in cell types
- VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | 0.27 | 0.62 | 2.03 |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, homa-ir, late onset alzheimers disease, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), major depressive disorder (broad definition) (males), n-acetyl-p-benzoquinonimine (napqi) ic50 values, postoperative nausea and vomiting, triglycerides change with statins