rs1377416 chr11:47395195 C>T
- Sequence
ggcctactttggccacccttaaat[C/T]agaatgtggggtcaggggtcacag
- ASB in cell types
- K562 (myelogenous leukemia) neutrophils from periferal blood
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.04 | 0.92 | 2.00 | |||
| neutrophils from periferal blood | 1.76 | -0.64 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, body mass index (bmi), chronic kidney disease, diastolic blood pressure (dbp), fasting blood glucose, homa-b, serum creatinine, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Amygdala, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood