rs1377829 chr3:176572962 T>G
- Sequence
caagtaccttaccctgtgtaactt[T/G]tatctgtcaaagcaaacaatgctt
- ASB in cell types
- 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | -4.26 | 2.21 | 2.00 | |||
| VCaP (prostate carcinoma) | 1.27 | 0.16 | 2.04 |
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