rs1378496 chr17:41495320 G>A

Sequence
accaccttctcccctggggccagc[G/A]ctccctgcacagctgcactggctg
ASB in cell types
HCT-116 (colon carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma) -0.40 1.29 1.006.8·10-3 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  triglycerides change with statins
GTEx eQTL Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Ovary,  Pituitary,  Prostate,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis

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