rs1379279 chr19:28322590 C>T

Sequence
aagctttgtcacattcctgggaat[C/T]tataagaccctgagaatctgtcca
ASB in cell types
HeLa S3 (cervical adenocarcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HeLa S3 (cervical adenocarcinoma) -0.16 2.12 0.920.03 2.00
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  major depressive disorder (narrow definition),  major depressive disorder (narrow definition) (females),  transmission distortion
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal

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