ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs137980
chr22:39929157
C
>
T
Sequence
atggtattgtagcaatatcagttt[C/T]ctagctttgatactgtactatggt
ASB in cell types
MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
3.02
0.48
1.4·10
-4
0.87
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
arthritis including non-rheumatoid
,
hdl cholesterol
,
hdl cholesterol change with statins
,
longstanding arthritis
,
refractive error
,
salmonella-induced pyroptosis
,
tetrology of fallot
,
total cholesterol
GTEx eQTL
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)